HALOWERKBiowerk
allergen epitope
Builds amino-acid k-mer sets, calculates Jaccard similarity, and finds the highest contiguous identity between each supplied epitope and any equal-length window of the query. It does not predict immune binding, allergenicity, cross-reactivity or clinical risk and cannot replace curated databases or laboratory testing.
POST https://bio.halowerk.com/v1/allergen-epitopeEingaben
| Feld | Typ | Pflicht | Beschreibung |
|---|---|---|---|
| query_sequence | string | Ja | |
| known_epitopes | array | Ja | |
| kmer_size | integer | Ja |
Vollständiges Eingabeschema anzeigen
{
"type": "object",
"required": [
"query_sequence",
"known_epitopes",
"kmer_size"
],
"additionalProperties": false,
"properties": {
"query_sequence": {
"type": "string",
"minLength": 2,
"maxLength": 10000,
"pattern": "^[ACDEFGHIKLMNPQRSTVWY]+$"
},
"known_epitopes": {
"type": "array",
"minItems": 1,
"maxItems": 200,
"items": {
"type": "object",
"required": [
"id",
"sequence"
],
"additionalProperties": false,
"properties": {
"id": {
"type": "string",
"minLength": 1,
"maxLength": 128
},
"sequence": {
"type": "string",
"minLength": 2,
"maxLength": 500,
"pattern": "^[ACDEFGHIKLMNPQRSTVWY]+$"
}
}
}
},
"kmer_size": {
"type": "integer",
"minimum": 2,
"maximum": 12
}
}
}Veröffentlichtes Eingabebeispiel
{
"query_sequence": "MKTLLVLLAVASASVQAAPVYIAGQ",
"known_epitopes": [
{
"id": "epitope-a",
"sequence": "PVYIAG"
},
{
"id": "epitope-b",
"sequence": "LLAVAT"
}
],
"kmer_size": 3
}Ergebnis & Dokumentation
Maschinenlesbare Dokumentation dieses Hubs
Quelle dieser Seite: der veröffentlichte HALOWERK-Katalog. Stand: 2026-11-01, 15:19 UTC.
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